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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lrtARibosome-associated protein Y; Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase; 100S ribosomes are translationally inactive and sometimes present during exponential growth. (194 aa)    
Predicted Functional Partners:
rplI
50S ribosomal protein L9; Binds to the 23S rRNA.
 
   0.959
rpsU
30S Ribosomal protein S21; Belongs to the bacterial ribosomal protein bS21 family.
   
 
 0.957
rplO
50S ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family.
  
 
 
 0.956
rpmA
COG211 Ribosomal protein L27 [Translation, ribosomal structure and biogenesis]; Belongs to the bacterial ribosomal protein bL27 family.
    
 
 0.954
rpsI
COG103 Ribosomal protein S9 [Translation, ribosomal structure and biogenesis]; Belongs to the universal ribosomal protein uS9 family.
   
 
 0.954
rpl34
50S ribosomal protein L34; Belongs to the bacterial ribosomal protein bL34 family.
    
 
 0.953
rpmC
COG255 Ribosomal protein L29 [Translation, ribosomal structure and biogenesis]; Belongs to the universal ribosomal protein uL29 family.
    
 
 0.952
rpsP
COG228 Ribosomal protein S16 [Translation, ribosomal structure and biogenesis]; Belongs to the bacterial ribosomal protein bS16 family.
    
 
 0.951
rpsL
30S ribosomal protein S12; With S4 and S5 plays an important role in translational accuracy.
    
 
 0.950
rpsE
30S ribosomal protein S5; With S4 and S12 plays an important role in translational accuracy; Belongs to the universal ribosomal protein uS5 family.
    
 
 0.950
Your Current Organism:
Prochlorococcus marinus MIT9215
NCBI taxonomy Id: 93060
Other names: P. marinus str. MIT 9215, Prochlorococcus marinus MIT 9215, Prochlorococcus marinus str. MIT 9215, Prochlorococcus sp. MIT 9215, Prochlorococcus sp. MIT9215
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