STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABV50127.1Conserved hypothetical protein. (153 aa)    
Predicted Functional Partners:
nrdJ
Ribonucleotide reductase (Class II).
 
     0.792
ABV51309.1
Conserved hypothetical protein.
  
     0.774
ABV50345.1
Conserved hypothetical protein.
  
     0.773
ABV50220.1
Phage integrase family.
  
     0.766
ABV50228.1
Conserved hypothetical protein; Catalyzes the decarbonylation of fatty aldehydes to alkanes.
  
     0.764
ABV50229.1
COG5322 Predicted dehydrogenase [General function prediction only].
  
     0.762
ABV50500.1
Conserved hypothetical protein.
  
     0.760
ABV49833.1
Conserved hypothetical protein.
  
     0.751
ABV51455.1
COG2109 ATP:corrinoid adenosyltransferase [Coenzyme metabolism].
  
     0.746
ABV49754.1
Conserved hypothetical protein.
  
     0.744
Your Current Organism:
Prochlorococcus marinus MIT9215
NCBI taxonomy Id: 93060
Other names: P. marinus str. MIT 9215, Prochlorococcus marinus MIT 9215, Prochlorococcus marinus str. MIT 9215, Prochlorococcus sp. MIT 9215, Prochlorococcus sp. MIT9215
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