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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABV50420.1Conserved hypothetical protein. (117 aa)    
Predicted Functional Partners:
ABV50421.1
Conserved hypothetical protein.
       0.671
ABV50417.1
Possible DUP family.
       0.620
ABV50418.1
Hypothetical protein.
       0.512
ABV50422.1
Putative potassium channel, VIC family; COG569 K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism].
       0.504
ABV50419.1
Conserved hypothetical protein.
       0.501
ABV50185.1
Conserved hypothetical protein.
  
     0.493
ABV49761.1
Conserved hypothetical protein; Belongs to the UPF0367 family.
  
     0.491
ABV49889.1
Conserved hypothetical protein.
  
     0.439
ABV51448.1
Conserved hypothetical protein.
  
     0.428
secE
Putative preprotein translocase, SecE subunit; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation.
  
     0.425
Your Current Organism:
Prochlorococcus marinus MIT9215
NCBI taxonomy Id: 93060
Other names: P. marinus str. MIT 9215, Prochlorococcus marinus MIT 9215, Prochlorococcus marinus str. MIT 9215, Prochlorococcus sp. MIT 9215, Prochlorococcus sp. MIT9215
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