STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABV50422.1Putative potassium channel, VIC family; COG569 K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]. (351 aa)    
Predicted Functional Partners:
trkG
Possible sodium transporter, Trk family; COG168 Trk-type K+ transport systems, membrane components [Inorganic ion transport and metabolism].
 
 
 0.815
pstS
COG226 ABC-type phosphate transport system, periplasmic component [Inorganic ion transport and metabolism]; Belongs to the PstS family.
     
 0.645
eriC
COG38 Chloride channel protein EriC [Inorganic ion transport and metabolism].
  
  
 0.640
pstA
COG581 ABC-type phosphate transport system, permease component [Inorganic ion transport and metabolism].
     
 0.564
pstC
Putative phosphate ABC transporter; Part of the binding-protein-dependent transport system for phosphate; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
     
 0.545
hemD
Putative uroporphyrinogen III synthase; Catalyzes cyclization of the linear tetrapyrrole, hydroxymethylbilane, to the macrocyclic uroporphyrinogen III.
  
    0.521
pstB
Putative phosphate ABC transporter, ATP binding subunit; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family.
       0.514
ABV50420.1
Conserved hypothetical protein.
       0.504
ABV50421.1
Conserved hypothetical protein.
       0.490
ABV50419.1
Conserved hypothetical protein.
       0.405
Your Current Organism:
Prochlorococcus marinus MIT9215
NCBI taxonomy Id: 93060
Other names: P. marinus str. MIT 9215, Prochlorococcus marinus MIT 9215, Prochlorococcus marinus str. MIT 9215, Prochlorococcus sp. MIT 9215, Prochlorococcus sp. MIT9215
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