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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABV50457.1Possible ABC transporter component; COG845 Membrane-fusion protein [Cell envelope biogenesis, outer membrane]. (304 aa)    
Predicted Functional Partners:
ABV50458.1
ABC-transporter, membrane spanning component; COG577 ABC-type antimicrobial peptide transport system, permease component [Defense mechanisms].
 
  
 0.984
tolC
Possible RND family outer membrane efflux protein; COG1538 Outer membrane protein [Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion].
  
 
 0.945
ABV50459.1
COG1136 ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms].
 
 
 0.913
ABV51040.1
COG1132 ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms].
  
 
 0.889
pcyA
Ferredoxin-dependent biliverdin reductase; Catalyzes the four-electron reduction of biliverdin IX-alpha (2-electron reduction at both the A and D rings); the reaction proceeds via an isolatable 2-electron intermediate, 181,182-dihydrobiliverdin. Belongs to the HY2 family.
 
     0.866
ABV50460.1
Conserved hypothetical protein.
       0.767
salY
Possible ABC transporter; COG577 ABC-type antimicrobial peptide transport system, permease component [Defense mechanisms].
 
  
 0.698
ABV50454.1
Insulinase family protein (Peptidase family M16); COG612 Predicted Zn-dependent peptidases [General function prediction only].
       0.668
ABV50455.1
COG612 Predicted Zn-dependent peptidases [General function prediction only]; Belongs to the peptidase M16 family.
       0.668
ABV50797.1
COG4188 Predicted dienelactone hydrolase [General function prediction only].
  
     0.663
Your Current Organism:
Prochlorococcus marinus MIT9215
NCBI taxonomy Id: 93060
Other names: P. marinus str. MIT 9215, Prochlorococcus marinus MIT 9215, Prochlorococcus marinus str. MIT 9215, Prochlorococcus sp. MIT 9215, Prochlorococcus sp. MIT9215
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