Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ABV50648.1Hypothetical protein. (128 aa)    
Predicted Functional Partners:
ABV50649.1
Hypothetical protein.
       0.820
ABV49692.1
YGGT family, conserved hypothetical integral membrane protein.
  
     0.768
ABV50380.1
Conserved hypothetical protein.
  
     0.752
ABV51330.1
Hypothetical protein.
  
     0.736
psbO
Photosystem II manganese-stabilizing protein.
  
   0.735
ABV50225.1
Conserved hypothetical protein.
  
    0.733
ABV50602.1
Conserved hypothetical protein.
  
     0.732
ABV49784.1
COG4094 Predicted membrane protein [Function unknown].
  
     0.725
ABV50561.1
Conserved hypothetical protein.
  
     0.708
psb27
Possible Photosystem II reaction center Psb27 protein; Plays a role in the repair and/or biogenesis of the calcium- manganese-oxide cluster on the lumenal face of the thylakoid membrane. Its presence in a photosystem II (PSII) preparation prevents binding of some small extrinsic subunits and thus assembly of calcium-manganese- oxide cluster.
  
     0.707
Your Current Organism:
Prochlorococcus marinus MIT9215
NCBI taxonomy Id: 93060
Other names: P. marinus str. MIT 9215, Prochlorococcus marinus MIT 9215, Prochlorococcus marinus str. MIT 9215, Prochlorococcus sp. MIT 9215, Prochlorococcus sp. MIT9215
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