Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
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[Homology]
Score
ABV50709.1Possible Josephin. (167 aa)    
Predicted Functional Partners:
ABV50710.1
Conserved hypothetical protein.
       0.607
ABV50712.1
COG3613 Nucleoside 2-deoxyribosyltransferase [Nucleotide transport and metabolism].
       0.607
ABV50711.1
Putative purine phosphoribosyltransferase-related protein.
       0.593
rpsU
30S Ribosomal protein S21; Belongs to the bacterial ribosomal protein bS21 family.
       0.516
ABV50708.1
Conserved hypothetical protein.
       0.432
Your Current Organism:
Prochlorococcus marinus MIT9215
NCBI taxonomy Id: 93060
Other names: P. marinus str. MIT 9215, Prochlorococcus marinus MIT 9215, Prochlorococcus marinus str. MIT 9215, Prochlorococcus sp. MIT 9215, Prochlorococcus sp. MIT9215
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