Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABV50833.1 | aarF | P9215_12181 | P9215_12191 | Possible Helix-turn-helix. | Possible kinase; COG661 Predicted unusual protein kinase [General function prediction only]. | 0.617 |
ABV50833.1 | cad | P9215_12181 | P9215_12201 | Possible Helix-turn-helix. | COG1982 Arginine/lysine/ornithine decarboxylases [Amino acid transport and metabolism]. | 0.407 |
aarF | ABV50833.1 | P9215_12191 | P9215_12181 | Possible kinase; COG661 Predicted unusual protein kinase [General function prediction only]. | Possible Helix-turn-helix. | 0.617 |
aarF | cad | P9215_12191 | P9215_12201 | Possible kinase; COG661 Predicted unusual protein kinase [General function prediction only]. | COG1982 Arginine/lysine/ornithine decarboxylases [Amino acid transport and metabolism]. | 0.669 |
aarF | cdsA | P9215_12191 | P9215_12211 | Possible kinase; COG661 Predicted unusual protein kinase [General function prediction only]. | Phosphatidate cytidylyltransferase; COG575 CDP-diglyceride synthetase [Lipid metabolism]; Belongs to the CDS family. | 0.646 |
aarF | eriC | P9215_12191 | P9215_19741 | Possible kinase; COG661 Predicted unusual protein kinase [General function prediction only]. | COG38 Chloride channel protein EriC [Inorganic ion transport and metabolism]. | 0.463 |
cad | ABV50833.1 | P9215_12201 | P9215_12181 | COG1982 Arginine/lysine/ornithine decarboxylases [Amino acid transport and metabolism]. | Possible Helix-turn-helix. | 0.407 |
cad | aarF | P9215_12201 | P9215_12191 | COG1982 Arginine/lysine/ornithine decarboxylases [Amino acid transport and metabolism]. | Possible kinase; COG661 Predicted unusual protein kinase [General function prediction only]. | 0.669 |
cad | cdsA | P9215_12201 | P9215_12211 | COG1982 Arginine/lysine/ornithine decarboxylases [Amino acid transport and metabolism]. | Phosphatidate cytidylyltransferase; COG575 CDP-diglyceride synthetase [Lipid metabolism]; Belongs to the CDS family. | 0.799 |
cdsA | aarF | P9215_12211 | P9215_12191 | Phosphatidate cytidylyltransferase; COG575 CDP-diglyceride synthetase [Lipid metabolism]; Belongs to the CDS family. | Possible kinase; COG661 Predicted unusual protein kinase [General function prediction only]. | 0.646 |
cdsA | cad | P9215_12211 | P9215_12201 | Phosphatidate cytidylyltransferase; COG575 CDP-diglyceride synthetase [Lipid metabolism]; Belongs to the CDS family. | COG1982 Arginine/lysine/ornithine decarboxylases [Amino acid transport and metabolism]. | 0.799 |
eriC | aarF | P9215_19741 | P9215_12191 | COG38 Chloride channel protein EriC [Inorganic ion transport and metabolism]. | Possible kinase; COG661 Predicted unusual protein kinase [General function prediction only]. | 0.463 |