STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ABV51025.1Hypothetical protein. (451 aa)    
Predicted Functional Partners:
ABV51067.1
Hypothetical protein.
  
  
 0.833
ABV51024.1
Conserved hypothetical protein.
 
     0.812
manC
COG836 Mannose-1-phosphate guanylyltransferase [Cell envelope biogenesis, outer membrane]; Belongs to the mannose-6-phosphate isomerase type 2 family.
  
  
 0.754
ABV49988.1
Conserved hypothetical protein.
  
     0.704
ABV51117.1
Conserved hypothetical protein.
  
     0.688
gumC
COG3206 Uncharacterized protein involved in exopolysaccharide biosynthesis [Cell envelope biogenesis, outer membrane].
  
  
 0.673
ABV49775.1
Putative molecular chaperone.
  
     0.672
ABV51468.1
Conserved hypothetical protein.
  
     0.663
ABV50751.1
COG3686 Predicted membrane protein [Function unknown].
  
     0.629
ABV51197.1
Conserved hypothetical protein.
  
     0.624
Your Current Organism:
Prochlorococcus marinus MIT9215
NCBI taxonomy Id: 93060
Other names: P. marinus str. MIT 9215, Prochlorococcus marinus MIT 9215, Prochlorococcus marinus str. MIT 9215, Prochlorococcus sp. MIT 9215, Prochlorococcus sp. MIT9215
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