Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABV51067.1 | ABV51068.1 | P9215_14541 | P9215_14551 | Hypothetical protein. | COG1216 Predicted glycosyltransferases [General function prediction only]. | 0.836 |
ABV51067.1 | gumC | P9215_14541 | P9215_14561 | Hypothetical protein. | COG3206 Uncharacterized protein involved in exopolysaccharide biosynthesis [Cell envelope biogenesis, outer membrane]. | 0.996 |
ABV51067.1 | manC | P9215_14541 | P9215_14171 | Hypothetical protein. | COG836 Mannose-1-phosphate guanylyltransferase [Cell envelope biogenesis, outer membrane]; Belongs to the mannose-6-phosphate isomerase type 2 family. | 0.998 |
ABV51068.1 | ABV51067.1 | P9215_14551 | P9215_14541 | COG1216 Predicted glycosyltransferases [General function prediction only]. | Hypothetical protein. | 0.836 |
ABV51068.1 | gumC | P9215_14551 | P9215_14561 | COG1216 Predicted glycosyltransferases [General function prediction only]. | COG3206 Uncharacterized protein involved in exopolysaccharide biosynthesis [Cell envelope biogenesis, outer membrane]. | 0.761 |
ABV51068.1 | manC | P9215_14551 | P9215_14171 | COG1216 Predicted glycosyltransferases [General function prediction only]. | COG836 Mannose-1-phosphate guanylyltransferase [Cell envelope biogenesis, outer membrane]; Belongs to the mannose-6-phosphate isomerase type 2 family. | 0.730 |
gumC | ABV51067.1 | P9215_14561 | P9215_14541 | COG3206 Uncharacterized protein involved in exopolysaccharide biosynthesis [Cell envelope biogenesis, outer membrane]. | Hypothetical protein. | 0.996 |
gumC | ABV51068.1 | P9215_14561 | P9215_14551 | COG3206 Uncharacterized protein involved in exopolysaccharide biosynthesis [Cell envelope biogenesis, outer membrane]. | COG1216 Predicted glycosyltransferases [General function prediction only]. | 0.761 |
gumC | manC | P9215_14561 | P9215_14171 | COG3206 Uncharacterized protein involved in exopolysaccharide biosynthesis [Cell envelope biogenesis, outer membrane]. | COG836 Mannose-1-phosphate guanylyltransferase [Cell envelope biogenesis, outer membrane]; Belongs to the mannose-6-phosphate isomerase type 2 family. | 0.739 |
manC | ABV51067.1 | P9215_14171 | P9215_14541 | COG836 Mannose-1-phosphate guanylyltransferase [Cell envelope biogenesis, outer membrane]; Belongs to the mannose-6-phosphate isomerase type 2 family. | Hypothetical protein. | 0.998 |
manC | ABV51068.1 | P9215_14171 | P9215_14551 | COG836 Mannose-1-phosphate guanylyltransferase [Cell envelope biogenesis, outer membrane]; Belongs to the mannose-6-phosphate isomerase type 2 family. | COG1216 Predicted glycosyltransferases [General function prediction only]. | 0.730 |
manC | gumC | P9215_14171 | P9215_14561 | COG836 Mannose-1-phosphate guanylyltransferase [Cell envelope biogenesis, outer membrane]; Belongs to the mannose-6-phosphate isomerase type 2 family. | COG3206 Uncharacterized protein involved in exopolysaccharide biosynthesis [Cell envelope biogenesis, outer membrane]. | 0.739 |