STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABV51197.1Conserved hypothetical protein. (188 aa)    
Predicted Functional Partners:
ABV51198.1
RNA-binding S4; COG2302 Uncharacterized conserved protein, contains S4-like domain [Function unknown].
       0.830
ABV50797.1
COG4188 Predicted dienelactone hydrolase [General function prediction only].
  
     0.772
ABV49833.1
Conserved hypothetical protein.
  
     0.769
ABV51384.1
Conserved hypothetical protein.
  
     0.769
ABV50872.1
Possible porin; Belongs to the OprB family.
  
     0.766
ABV50297.1
Conserved hypothetical protein.
  
     0.765
ABV49879.1
Conserved hypothetical protein.
  
     0.764
ABV50993.1
Conserved hypothetical protein.
  
     0.762
ABV51468.1
Conserved hypothetical protein.
  
     0.761
ABV50505.1
Conserved hypothetical protein.
  
     0.759
Your Current Organism:
Prochlorococcus marinus MIT9215
NCBI taxonomy Id: 93060
Other names: P. marinus str. MIT 9215, Prochlorococcus marinus MIT 9215, Prochlorococcus marinus str. MIT 9215, Prochlorococcus sp. MIT 9215, Prochlorococcus sp. MIT9215
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.