Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ABD29369.1 | ABD29370.1 | SAOUHSC_00191 | SAOUHSC_00192 | Conserved hypothetical protein. | Coagulase. | 0.501 |
| ABD29370.1 | ABD29369.1 | SAOUHSC_00192 | SAOUHSC_00191 | Coagulase. | Conserved hypothetical protein. | 0.501 |
| ABD29370.1 | ABD29945.1 | SAOUHSC_00192 | SAOUHSC_00818 | Coagulase. | Thermonuclease precursor. | 0.478 |
| ABD29370.1 | ABD30581.1 | SAOUHSC_00192 | SAOUHSC_01496 | Coagulase. | Cytidylate kinase. | 0.505 |
| ABD29370.1 | clfA | SAOUHSC_00192 | SAOUHSC_00812 | Coagulase. | Clumping factor; Cell surface-associated protein implicated in virulence. Promotes bacterial attachment exclusively to the gamma-chain of human fibrinogen. Induces formation of bacterial clumps, which diminish the ability of group IIA phospholipase A2 to cause bacterial phospholipid hydrolysis and killing. Significantly decreases macrophage phagocytosis possibly thanks to the clumps, clumped bacteria being too large to be phagocytosed. Dominant factor responsible for human platelet aggregation, which may be an important mechanism for initiating infective endocarditis. Enhances spleen c [...] | 0.473 |
| ABD29370.1 | der | SAOUHSC_00192 | SAOUHSC_01492 | Coagulase. | Conserved hypothetical protein; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family. | 0.446 |
| ABD29370.1 | hlb | SAOUHSC_00192 | SAOUHSC_02240 | Coagulase. | Truncated beta-hemolysin; Bacterial hemolysins are exotoxins that attack blood cell membranes and cause cell rupture. Beta-hemolysin is a phospholipase C with specific activity toward sphingomyelins. Has a high specificity for sphingomyelin, hydrolyzes lysophosphatidylcholine at a much lower rate, but has no activity towards phosphatidylcholine, phosphatidylethanolamine, or phosphatidylserine; Belongs to the neutral sphingomyelinase family. | 0.432 |
| ABD29370.1 | hly | SAOUHSC_00192 | SAOUHSC_01121 | Coagulase. | Alpha-hemolysin precursor; Alpha-toxin binds to the membrane of eukaryotic cells resulting in the release of low-molecular weight molecules and leading to an eventual osmotic lysis. Inhibits host neutrophil chemotaxis to the lesion region (Probable). Heptamer oligomerization and pore formation is required for lytic activity (By similarity). Belongs to the aerolysin family. | 0.433 |
| ABD29370.1 | icaA | SAOUHSC_00192 | SAOUHSC_03002 | Coagulase. | Intercellular adhesion protein A, putative; N-acetylglucosaminyltransferase that catalyzes the polymerization of single monomer units of UDP-N-acetylglucosamine to produce the linear homopolymer poly-beta-1,6-N-acetyl-D-glucosamine (PNAG, also referred to as PIA), a biofilm adhesin polysaccharide. Requires IcaD for full activity (By similarity). | 0.487 |
| ABD29370.1 | mecA | SAOUHSC_00192 | SAOUHSC_00935 | Coagulase. | Conserved hypothetical protein; Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis. | 0.542 |
| ABD29370.1 | scpB | SAOUHSC_00192 | SAOUHSC_01588 | Coagulase. | Conserved hypothetical protein; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves. | 0.437 |
| ABD29945.1 | ABD29370.1 | SAOUHSC_00818 | SAOUHSC_00192 | Thermonuclease precursor. | Coagulase. | 0.478 |
| ABD29945.1 | clfA | SAOUHSC_00818 | SAOUHSC_00812 | Thermonuclease precursor. | Clumping factor; Cell surface-associated protein implicated in virulence. Promotes bacterial attachment exclusively to the gamma-chain of human fibrinogen. Induces formation of bacterial clumps, which diminish the ability of group IIA phospholipase A2 to cause bacterial phospholipid hydrolysis and killing. Significantly decreases macrophage phagocytosis possibly thanks to the clumps, clumped bacteria being too large to be phagocytosed. Dominant factor responsible for human platelet aggregation, which may be an important mechanism for initiating infective endocarditis. Enhances spleen c [...] | 0.438 |
| ABD29945.1 | hlb | SAOUHSC_00818 | SAOUHSC_02240 | Thermonuclease precursor. | Truncated beta-hemolysin; Bacterial hemolysins are exotoxins that attack blood cell membranes and cause cell rupture. Beta-hemolysin is a phospholipase C with specific activity toward sphingomyelins. Has a high specificity for sphingomyelin, hydrolyzes lysophosphatidylcholine at a much lower rate, but has no activity towards phosphatidylcholine, phosphatidylethanolamine, or phosphatidylserine; Belongs to the neutral sphingomyelinase family. | 0.451 |
| ABD29945.1 | hly | SAOUHSC_00818 | SAOUHSC_01121 | Thermonuclease precursor. | Alpha-hemolysin precursor; Alpha-toxin binds to the membrane of eukaryotic cells resulting in the release of low-molecular weight molecules and leading to an eventual osmotic lysis. Inhibits host neutrophil chemotaxis to the lesion region (Probable). Heptamer oligomerization and pore formation is required for lytic activity (By similarity). Belongs to the aerolysin family. | 0.448 |
| ABD29945.1 | mecA | SAOUHSC_00818 | SAOUHSC_00935 | Thermonuclease precursor. | Conserved hypothetical protein; Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis. | 0.441 |
| ABD30581.1 | ABD29370.1 | SAOUHSC_01496 | SAOUHSC_00192 | Cytidylate kinase. | Coagulase. | 0.505 |
| ABD30581.1 | der | SAOUHSC_01496 | SAOUHSC_01492 | Cytidylate kinase. | Conserved hypothetical protein; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family. | 0.986 |
| ABD30581.1 | scpB | SAOUHSC_01496 | SAOUHSC_01588 | Cytidylate kinase. | Conserved hypothetical protein; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves. | 0.701 |
| clfA | ABD29370.1 | SAOUHSC_00812 | SAOUHSC_00192 | Clumping factor; Cell surface-associated protein implicated in virulence. Promotes bacterial attachment exclusively to the gamma-chain of human fibrinogen. Induces formation of bacterial clumps, which diminish the ability of group IIA phospholipase A2 to cause bacterial phospholipid hydrolysis and killing. Significantly decreases macrophage phagocytosis possibly thanks to the clumps, clumped bacteria being too large to be phagocytosed. Dominant factor responsible for human platelet aggregation, which may be an important mechanism for initiating infective endocarditis. Enhances spleen c [...] | Coagulase. | 0.473 |
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