Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ABD29391.1PTS system component, putative. (92 aa)    
Predicted Functional Partners:
ABD29392.1
PTS system component.
 
 0.998
ABD29390.1
Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2, putative.
 
 
  0.995
ABD29389.1
Conserved hypothetical protein.
 
  
 0.958
ABD29395.1
Conserved hypothetical protein.
    0.930
ABD30149.1
Phosphocarrier protein hpr, putative.
    
  0.903
ABD29393.1
Sorbitol dehydrogenase, putative.
    0.852
ABD29482.1
Conserved hypothetical protein.
 
  
 0.714
ABD31963.1
Conserved hypothetical protein.
 
  
 0.678
ABD31430.1
Conserved hypothetical protein.
 
     0.640
ABD29394.1
Conserved hypothetical protein.
       0.526
Your Current Organism:
Staphylococcus aureus
NCBI taxonomy Id: 93061
Other names: S. aureus subsp. aureus NCTC 8325, Staphylococcus aureus NCTC 8325, Staphylococcus aureus subsp. aureus NCTC 8325, Staphylococcus aureus subsp. aureus str. NCTC 8325, Staphylococcus aureus subsp. aureus strain NCTC 8325
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