Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ABD29487.1Conserved hypothetical protein. (308 aa)    
Predicted Functional Partners:
ABD31826.1
Conserved hypothetical protein.
    0.942
ABD29488.1
Conserved hypothetical protein.
 
    0.931
ABD29489.1
NADPH-dependent FMN reductase, putative.
  
  
 0.841
ABD30509.1
Conserved hypothetical protein.
  
     0.770
ABD30268.1
Conserved hypothetical protein.
  
    0.697
ABD31830.1
Conserved hypothetical protein.
  
    0.664
ABD29959.1
Conserved hypothetical protein.
   
  
 0.603
ABD30953.1
Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.
    
 
 0.542
ABD30952.1
Riboflavin synthase, alpha subunit.
      
 0.498
ABD31356.1
Conserved hypothetical protein.
      
 0.485
Your Current Organism:
Staphylococcus aureus
NCBI taxonomy Id: 93061
Other names: S. aureus subsp. aureus NCTC 8325, Staphylococcus aureus NCTC 8325, Staphylococcus aureus subsp. aureus NCTC 8325, Staphylococcus aureus subsp. aureus str. NCTC 8325, Staphylococcus aureus subsp. aureus strain NCTC 8325
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