Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ABD29598.1Conserved hypothetical protein. (242 aa)    
Predicted Functional Partners:
ABD29596.1
Conserved hypothetical protein.
 
  
 0.849
ABD29597.1
Alpha amylase family protein, putative.
 
  
 0.782
ABD31307.1
Sucrose operon repressor, putative.
  
   
 0.689
ABD31669.1
PTS system sucrose-specific IIBC component, putative.
 
  
 0.649
ABD31670.1
PTS system sucrose-specific IIBC component.
 
  
 0.615
ABD31306.1
Sucrose-6-phosphate dehydrogenase, putative; Enables the bacterium to metabolize sucrose as a sole carbon source; Belongs to the glycosyl hydrolase 32 family.
  
    0.587
ABD30165.1
Conserved hypothetical protein.
  
  
 0.571
Your Current Organism:
Staphylococcus aureus
NCBI taxonomy Id: 93061
Other names: S. aureus subsp. aureus NCTC 8325, Staphylococcus aureus NCTC 8325, Staphylococcus aureus subsp. aureus NCTC 8325, Staphylococcus aureus subsp. aureus str. NCTC 8325, Staphylococcus aureus subsp. aureus strain NCTC 8325
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