Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ABD29193.1 | ABD29609.1 | SAOUHSC_00002 | SAOUHSC_00454 | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | DNA polymerase III, delta prime subunit, putative. | 0.995 |
| ABD29193.1 | ABD29611.1 | SAOUHSC_00002 | SAOUHSC_00456 | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | Conserved hypothetical protein; Involved in initiation control of chromosome replication. Belongs to the YabA family. | 0.770 |
| ABD29193.1 | dnaA | SAOUHSC_00002 | SAOUHSC_00001 | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | Chromosomal replication initiator protein DnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. | 0.994 |
| ABD29609.1 | ABD29193.1 | SAOUHSC_00454 | SAOUHSC_00002 | DNA polymerase III, delta prime subunit, putative. | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.995 |
| ABD29609.1 | ABD29610.1 | SAOUHSC_00454 | SAOUHSC_00455 | DNA polymerase III, delta prime subunit, putative. | Conserved hypothetical protein. | 0.818 |
| ABD29609.1 | ABD29611.1 | SAOUHSC_00454 | SAOUHSC_00456 | DNA polymerase III, delta prime subunit, putative. | Conserved hypothetical protein; Involved in initiation control of chromosome replication. Belongs to the YabA family. | 0.733 |
| ABD29609.1 | ABD29612.1 | SAOUHSC_00454 | SAOUHSC_00457 | DNA polymerase III, delta prime subunit, putative. | Conserved hypothetical protein. | 0.576 |
| ABD29609.1 | ABD29613.1 | SAOUHSC_00454 | SAOUHSC_00458 | DNA polymerase III, delta prime subunit, putative. | Conserved hypothetical protein; Belongs to the UPF0213 family. | 0.401 |
| ABD29609.1 | tmk | SAOUHSC_00454 | SAOUHSC_00451 | DNA polymerase III, delta prime subunit, putative. | Thymidylate kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family. | 0.773 |
| ABD29610.1 | ABD29609.1 | SAOUHSC_00455 | SAOUHSC_00454 | Conserved hypothetical protein. | DNA polymerase III, delta prime subunit, putative. | 0.818 |
| ABD29610.1 | ABD29611.1 | SAOUHSC_00455 | SAOUHSC_00456 | Conserved hypothetical protein. | Conserved hypothetical protein; Involved in initiation control of chromosome replication. Belongs to the YabA family. | 0.817 |
| ABD29610.1 | ABD29612.1 | SAOUHSC_00455 | SAOUHSC_00457 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.734 |
| ABD29610.1 | ABD29613.1 | SAOUHSC_00455 | SAOUHSC_00458 | Conserved hypothetical protein. | Conserved hypothetical protein; Belongs to the UPF0213 family. | 0.672 |
| ABD29610.1 | rsmI | SAOUHSC_00455 | SAOUHSC_00459 | Conserved hypothetical protein. | Conserved hypothetical protein; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA. | 0.695 |
| ABD29610.1 | tmk | SAOUHSC_00455 | SAOUHSC_00451 | Conserved hypothetical protein. | Thymidylate kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family. | 0.534 |
| ABD29611.1 | ABD29193.1 | SAOUHSC_00456 | SAOUHSC_00002 | Conserved hypothetical protein; Involved in initiation control of chromosome replication. Belongs to the YabA family. | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.770 |
| ABD29611.1 | ABD29609.1 | SAOUHSC_00456 | SAOUHSC_00454 | Conserved hypothetical protein; Involved in initiation control of chromosome replication. Belongs to the YabA family. | DNA polymerase III, delta prime subunit, putative. | 0.733 |
| ABD29611.1 | ABD29610.1 | SAOUHSC_00456 | SAOUHSC_00455 | Conserved hypothetical protein; Involved in initiation control of chromosome replication. Belongs to the YabA family. | Conserved hypothetical protein. | 0.817 |
| ABD29611.1 | ABD29612.1 | SAOUHSC_00456 | SAOUHSC_00457 | Conserved hypothetical protein; Involved in initiation control of chromosome replication. Belongs to the YabA family. | Conserved hypothetical protein. | 0.711 |
| ABD29611.1 | ABD29613.1 | SAOUHSC_00456 | SAOUHSC_00458 | Conserved hypothetical protein; Involved in initiation control of chromosome replication. Belongs to the YabA family. | Conserved hypothetical protein; Belongs to the UPF0213 family. | 0.710 |
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