STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABD29781.1Penicillin-binding protein 4, putative; Belongs to the peptidase S11 family. (431 aa)    
Predicted Functional Partners:
ABD30552.1
Penicillin-binding protein 2.
   
 
 0.972
ABD30255.1
Penicillin-binding protein 1.
 
 
 0.964
ABD30728.1
Penicillin-binding protein 3.
  
 
 0.959
mgt
Transglycosylase domain protein; Peptidoglycan polymerase that catalyzes glycan chain elongation using lipid-linked disaccharide-pentapeptide as the substrate.
  
 
 0.959
ABD30908.1
Transglycosylase domain protein.
   
 
 0.897
lytH
Conserved hypothetical protein; Probably involved in cell-wall metabolism (By similarity). May have autolysin activity. Belongs to the N-acetylmuramoyl-L-alanine amidase 3 family.
   
 
 0.598
ABD31967.1
Conserved hypothetical protein; In the N-terminal section; belongs to the N-acetylmuramoyl- L-alanine amidase 2 family.
  
  
 0.532
ABD29782.1
Conserved hypothetical protein.
       0.525
ABD30294.1
Conserved hypothetical protein.
   
 
 0.513
ABD30923.1
Conserved hypothetical protein; Belongs to the FtsK/SpoIIIE/SftA family.
  
  
 0.507
Your Current Organism:
Staphylococcus aureus
NCBI taxonomy Id: 93061
Other names: S. aureus subsp. aureus NCTC 8325, Staphylococcus aureus NCTC 8325, Staphylococcus aureus subsp. aureus NCTC 8325, Staphylococcus aureus subsp. aureus str. NCTC 8325, Staphylococcus aureus subsp. aureus strain NCTC 8325
Server load: medium (46%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.