Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ABD29806.1Conserved hypothetical protein. (716 aa)    
Predicted Functional Partners:
sarX
Conserved hypothetical protein; Involved in the regulation of virulence genes. Acts as a repressor of the agr locus and consequently targets genes regulated by the agr system such as sspA, hla and hlb. Binds directly to the agr promoter region.
     
 0.676
ABD30605.1
SLT orf 527-like protein.
  
     0.565
ABD29502.1
Conserved hypothetical protein.
  
     0.562
ABD31296.1
Conserved hypothetical protein.
  
     0.549
lipA-2
Lipase.
  
   
 0.546
ABD30116.1
Transcriptional regulator, MarR family, putative.
  
    0.540
ABD30938.1
Conserved hypothetical protein.
  
     0.512
ABD31458.1
Conserved hypothetical protein.
  
     0.510
ABD31195.1
Conserved hypothetical protein.
  
     0.497
ABD30679.1
Conserved hypothetical protein.
  
     0.496
Your Current Organism:
Staphylococcus aureus
NCBI taxonomy Id: 93061
Other names: S. aureus subsp. aureus NCTC 8325, Staphylococcus aureus NCTC 8325, Staphylococcus aureus subsp. aureus NCTC 8325, Staphylococcus aureus subsp. aureus str. NCTC 8325, Staphylococcus aureus subsp. aureus strain NCTC 8325
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