Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ABD29826.1Conserved hypothetical protein. (557 aa)    
Predicted Functional Partners:
ABD29825.1
Conserved hypothetical protein.
 
0.999
ABD30153.1
Cytochrome d ubiquinol oxidase, subunit II, putative.
 
  
 0.861
ABD30152.1
Cytochrome d ubiquinol oxidase, subunit I, putative.
 
  
 0.771
uppP
Undecaprenol kinase, putative; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family.
       0.683
ABD30116.1
Transcriptional regulator, MarR family, putative.
  
   
 0.629
ABD29823.1
Conserved hypothetical protein.
 
     0.626
ABD30115.1
Conserved hypothetical protein.
  
   
 0.618
ABD30016.1
Peptidyl-prolyl cis-trans isomerase, cyclophilin-type, putative; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides (By similarity); Belongs to the cyclophilin-type PPIase family.
  
   
 0.595
ABD30587.1
Conserved hypothetical protein.
  
   
 0.516
ABD31705.1
Amino acid ABC transporter, ATP-binding protein, putative.
 
    
0.509
Your Current Organism:
Staphylococcus aureus
NCBI taxonomy Id: 93061
Other names: S. aureus subsp. aureus NCTC 8325, Staphylococcus aureus NCTC 8325, Staphylococcus aureus subsp. aureus NCTC 8325, Staphylococcus aureus subsp. aureus str. NCTC 8325, Staphylococcus aureus subsp. aureus strain NCTC 8325
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