Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ABD29956.1Conserved hypothetical protein. (164 aa)    
Predicted Functional Partners:
ABD30587.1
Conserved hypothetical protein.
  
     0.697
ABD31535.1
Conserved hypothetical protein.
  
    0.686
ABD31592.1
Conserved hypothetical protein.
  
     0.650
ABD31030.1
Conserved hypothetical protein.
  
     0.613
ABD31296.1
Conserved hypothetical protein.
  
     0.552
ABD31195.1
Conserved hypothetical protein.
  
     0.538
ABD30605.1
SLT orf 527-like protein.
  
     0.514
ABD31456.1
Conserved hypothetical protein.
  
    0.513
tagX
tagX protein, putative; Belongs to the glycosyltransferase 2 family.
 
     0.480
ABD29955.1
Conserved hypothetical protein.
  
    0.476
Your Current Organism:
Staphylococcus aureus
NCBI taxonomy Id: 93061
Other names: S. aureus subsp. aureus NCTC 8325, Staphylococcus aureus NCTC 8325, Staphylococcus aureus subsp. aureus NCTC 8325, Staphylococcus aureus subsp. aureus str. NCTC 8325, Staphylococcus aureus subsp. aureus strain NCTC 8325
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