Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ABD29989.1Conserved hypothetical protein. (144 aa)    
Predicted Functional Partners:
ABD29988.1
Conserved hypothetical protein.
 
     0.899
nagD
Conserved hypothetical protein; Catalyzes the dephosphorylation of 2-6 carbon acid sugars in vitro.
     
 0.886
ABD30359.1
Conserved hypothetical protein.
  
     0.769
ABD31066.1
Conserved hypothetical protein.
  
     0.759
ABD29745.1
Conserved hypothetical protein.
  
     0.757
ABD30217.1
Succinate dehydrogenase cytochrome b-558 subunit, putative.
  
     0.747
cvfC
Conserved hypothetical protein; Required for hemolysin production. Contributes to virulence in both silkworm-infection model and mice.
  
     0.739
ABD30914.1
Conserved hypothetical protein.
  
     0.736
ABD29987.1
Conserved hypothetical protein.
 
  
 0.727
ABD30178.1
Conserved hypothetical protein.
  
     0.723
Your Current Organism:
Staphylococcus aureus
NCBI taxonomy Id: 93061
Other names: S. aureus subsp. aureus NCTC 8325, Staphylococcus aureus NCTC 8325, Staphylococcus aureus subsp. aureus NCTC 8325, Staphylococcus aureus subsp. aureus str. NCTC 8325, Staphylococcus aureus subsp. aureus strain NCTC 8325
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