Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ABD29324.1 | ABD29995.1 | SAOUHSC_00144 | SAOUHSC_00870 | Conserved hypothetical protein; Belongs to the ATP-dependent AMP-binding enzyme family. | dltB protein, putative; Could be involved in the transport of activated D-alanine through the membrane. | 0.999 |
| ABD29324.1 | ABD30932.1 | SAOUHSC_00144 | SAOUHSC_01867 | Conserved hypothetical protein; Belongs to the ATP-dependent AMP-binding enzyme family. | D-amino acid aminotransferase; Acts on the D-isomers of alanine, leucine, aspartate, glutamate, aminobutyrate, norvaline and asparagine. The enzyme transfers an amino group from a substrate D-amino acid to the pyridoxal phosphate cofactor to form pyridoxamine and an alpha-keto acid in the first half-reaction. | 0.680 |
| ABD29324.1 | alr1 | SAOUHSC_00144 | SAOUHSC_02305 | Conserved hypothetical protein; Belongs to the ATP-dependent AMP-binding enzyme family. | Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. | 0.751 |
| ABD29324.1 | alr2 | SAOUHSC_00144 | SAOUHSC_01400 | Conserved hypothetical protein; Belongs to the ATP-dependent AMP-binding enzyme family. | Alanine racemase, putative; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. | 0.751 |
| ABD29324.1 | ddl | SAOUHSC_00144 | SAOUHSC_02318 | Conserved hypothetical protein; Belongs to the ATP-dependent AMP-binding enzyme family. | D-alanine--D-alanine ligase; Cell wall formation. | 0.743 |
| ABD29324.1 | dltA | SAOUHSC_00144 | SAOUHSC_00869 | Conserved hypothetical protein; Belongs to the ATP-dependent AMP-binding enzyme family. | D-alanine-activating enzyme; Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D- alanyl carrier protein (Dcp) DltC. In an ATP-dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall. Belongs to the ATP-dependent AMP [...] | 0.959 |
| ABD29324.1 | dltC | SAOUHSC_00144 | SAOUHSC_00871 | Conserved hypothetical protein; Belongs to the ATP-dependent AMP-binding enzyme family. | D-alanyl carrier protein; Carrier protein involved in the D-alanylation of lipoteichoic acid (LTA). The loading of thioester-linked D-alanine onto DltC is catalyzed by D-alanine--D-alanyl carrier protein ligase DltA. The DltC- carried D-alanyl group is further transferred to cell membrane phosphatidylglycerol (PG) by forming an ester bond, probably catalyzed by DltD. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall. | 0.951 |
| ABD29324.1 | dltD | SAOUHSC_00144 | SAOUHSC_00872 | Conserved hypothetical protein; Belongs to the ATP-dependent AMP-binding enzyme family. | Extramembranal protein; Involved in the D-alanylation of lipoteichoic acid (LTA). Could be responsible for the transfer of DltC-carried D-alanyl groups to cell membrane phosphatidylglycerol (PG), or alternatively of D- alanine residues from D-Ala-undecaprenol phosphate to the poly(glycerophosphate) chains of LTA. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram- positive bacteria, influencing the net charge of the cell wall. | 0.999 |
| ABD29324.1 | hemL1 | SAOUHSC_00144 | SAOUHSC_01771 | Conserved hypothetical protein; Belongs to the ATP-dependent AMP-binding enzyme family. | Glutamate-1-semialdehyde-2,1-aminomutase. | 0.932 |
| ABD29324.1 | hemL2 | SAOUHSC_00144 | SAOUHSC_02000 | Conserved hypothetical protein; Belongs to the ATP-dependent AMP-binding enzyme family. | Glutamate-1-semialdehyde-2,1-aminomutase, putative. | 0.927 |
| ABD29995.1 | ABD29324.1 | SAOUHSC_00870 | SAOUHSC_00144 | dltB protein, putative; Could be involved in the transport of activated D-alanine through the membrane. | Conserved hypothetical protein; Belongs to the ATP-dependent AMP-binding enzyme family. | 0.999 |
| ABD29995.1 | dltA | SAOUHSC_00870 | SAOUHSC_00869 | dltB protein, putative; Could be involved in the transport of activated D-alanine through the membrane. | D-alanine-activating enzyme; Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D- alanyl carrier protein (Dcp) DltC. In an ATP-dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall. Belongs to the ATP-dependent AMP [...] | 0.999 |
| ABD29995.1 | dltC | SAOUHSC_00870 | SAOUHSC_00871 | dltB protein, putative; Could be involved in the transport of activated D-alanine through the membrane. | D-alanyl carrier protein; Carrier protein involved in the D-alanylation of lipoteichoic acid (LTA). The loading of thioester-linked D-alanine onto DltC is catalyzed by D-alanine--D-alanyl carrier protein ligase DltA. The DltC- carried D-alanyl group is further transferred to cell membrane phosphatidylglycerol (PG) by forming an ester bond, probably catalyzed by DltD. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall. | 0.999 |
| ABD29995.1 | dltD | SAOUHSC_00870 | SAOUHSC_00872 | dltB protein, putative; Could be involved in the transport of activated D-alanine through the membrane. | Extramembranal protein; Involved in the D-alanylation of lipoteichoic acid (LTA). Could be responsible for the transfer of DltC-carried D-alanyl groups to cell membrane phosphatidylglycerol (PG), or alternatively of D- alanine residues from D-Ala-undecaprenol phosphate to the poly(glycerophosphate) chains of LTA. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram- positive bacteria, influencing the net charge of the cell wall. | 0.999 |
| ABD30932.1 | ABD29324.1 | SAOUHSC_01867 | SAOUHSC_00144 | D-amino acid aminotransferase; Acts on the D-isomers of alanine, leucine, aspartate, glutamate, aminobutyrate, norvaline and asparagine. The enzyme transfers an amino group from a substrate D-amino acid to the pyridoxal phosphate cofactor to form pyridoxamine and an alpha-keto acid in the first half-reaction. | Conserved hypothetical protein; Belongs to the ATP-dependent AMP-binding enzyme family. | 0.680 |
| ABD30932.1 | alr1 | SAOUHSC_01867 | SAOUHSC_02305 | D-amino acid aminotransferase; Acts on the D-isomers of alanine, leucine, aspartate, glutamate, aminobutyrate, norvaline and asparagine. The enzyme transfers an amino group from a substrate D-amino acid to the pyridoxal phosphate cofactor to form pyridoxamine and an alpha-keto acid in the first half-reaction. | Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. | 0.926 |
| ABD30932.1 | alr2 | SAOUHSC_01867 | SAOUHSC_01400 | D-amino acid aminotransferase; Acts on the D-isomers of alanine, leucine, aspartate, glutamate, aminobutyrate, norvaline and asparagine. The enzyme transfers an amino group from a substrate D-amino acid to the pyridoxal phosphate cofactor to form pyridoxamine and an alpha-keto acid in the first half-reaction. | Alanine racemase, putative; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. | 0.905 |
| ABD30932.1 | ddl | SAOUHSC_01867 | SAOUHSC_02318 | D-amino acid aminotransferase; Acts on the D-isomers of alanine, leucine, aspartate, glutamate, aminobutyrate, norvaline and asparagine. The enzyme transfers an amino group from a substrate D-amino acid to the pyridoxal phosphate cofactor to form pyridoxamine and an alpha-keto acid in the first half-reaction. | D-alanine--D-alanine ligase; Cell wall formation. | 0.918 |
| ABD30932.1 | dltA | SAOUHSC_01867 | SAOUHSC_00869 | D-amino acid aminotransferase; Acts on the D-isomers of alanine, leucine, aspartate, glutamate, aminobutyrate, norvaline and asparagine. The enzyme transfers an amino group from a substrate D-amino acid to the pyridoxal phosphate cofactor to form pyridoxamine and an alpha-keto acid in the first half-reaction. | D-alanine-activating enzyme; Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D- alanyl carrier protein (Dcp) DltC. In an ATP-dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall. Belongs to the ATP-dependent AMP [...] | 0.899 |
| ABD30932.1 | dltC | SAOUHSC_01867 | SAOUHSC_00871 | D-amino acid aminotransferase; Acts on the D-isomers of alanine, leucine, aspartate, glutamate, aminobutyrate, norvaline and asparagine. The enzyme transfers an amino group from a substrate D-amino acid to the pyridoxal phosphate cofactor to form pyridoxamine and an alpha-keto acid in the first half-reaction. | D-alanyl carrier protein; Carrier protein involved in the D-alanylation of lipoteichoic acid (LTA). The loading of thioester-linked D-alanine onto DltC is catalyzed by D-alanine--D-alanyl carrier protein ligase DltA. The DltC- carried D-alanyl group is further transferred to cell membrane phosphatidylglycerol (PG) by forming an ester bond, probably catalyzed by DltD. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall. | 0.903 |
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