Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ABD30000.1Conserved hypothetical protein. (354 aa)    
Predicted Functional Partners:
ABD30003.1
Conserved hypothetical protein.
 
  
 
0.943
ABD30001.1
Conserved hypothetical protein; Belongs to the UPF0349 family.
 
   
 0.706
ABD30002.1
Conserved hypothetical protein; Belongs to the HesB/IscA family.
  
    0.623
ABD31369.1
Conserved hypothetical protein.
  
     0.569
ABD29594.1
Glutamate synthase, large subunit, putative.
      
 0.516
gpmA
Phosphoglycerate mutase, putative; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate.
    
   0.516
ABD30219.1
Iron-sulphur subunit of succinate dehydrogenase, putative.
  
 
 0.510
glpD
Conserved hypothetical protein; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.
   
 
 0.466
ABD30669.1
Conserved hypothetical protein.
  
     0.456
ABD29224.1
Conserved hypothetical protein; Belongs to the sulfur carrier protein TusA family.
     
 0.433
Your Current Organism:
Staphylococcus aureus
NCBI taxonomy Id: 93061
Other names: S. aureus subsp. aureus NCTC 8325, Staphylococcus aureus NCTC 8325, Staphylococcus aureus subsp. aureus NCTC 8325, Staphylococcus aureus subsp. aureus str. NCTC 8325, Staphylococcus aureus subsp. aureus strain NCTC 8325
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