Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ABD30043.1Truncated MHC class II analog protein. (144 aa)    
Predicted Functional Partners:
ABD31208.1
MHC class II analog protein.
     
 
0.900
ABD30064.1
Conserved hypothetical protein.
      
 0.618
ABD30365.1
Conserved hypothetical protein.
      
 0.618
ABD31198.1
Conserved hypothetical protein.
      
 0.618
ABD29567.1
Conserved hypothetical protein.
      
 0.541
ABD30039.1
2-isopropylmalate synthase, putative; Belongs to the alpha-IPM synthase/homocitrate synthase family.
       0.403
ABD30040.1
Conserved hypothetical protein; Belongs to the SUA5 family.
       0.403
ABD30041.1
Conserved hypothetical protein.
       0.403
ABD30042.1
Conserved hypothetical protein.
       0.403
Your Current Organism:
Staphylococcus aureus
NCBI taxonomy Id: 93061
Other names: S. aureus subsp. aureus NCTC 8325, Staphylococcus aureus NCTC 8325, Staphylococcus aureus subsp. aureus NCTC 8325, Staphylococcus aureus subsp. aureus str. NCTC 8325, Staphylococcus aureus subsp. aureus strain NCTC 8325
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