STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABD30056.1Oligopeptide ABC transporter, permease protein, putative. (320 aa)    
Predicted Functional Partners:
ABD30053.1
Oligopeptide ABC transporter, substrate-binding protein, putative.
 
  0.999
ABD30054.1
Oligopeptide ABC transporter, ATP-binding protein, putative; Belongs to the ABC transporter superfamily.
 
 
  0.999
ABD30057.1
Oligopeptide ABC transporter, permease protein, putative.
 
  0.999
ABD30055.1
Oligopeptide ABC transporter, ATP-binding protein, putative; Belongs to the ABC transporter superfamily.
 
  0.997
nikC
Oligopeptide transporter putative membrane permease domain; Part of the ABC transporter complex NikABCDE (Opp2) involved in nickel import. Probably responsible for the translocation of the substrate across the membrane. Required for full urease activity and plays a significant role in the virulence of S.aureus during urinary tract infection (UTI).
 
 
  0.978
nikA
Conserved hypothetical protein; Part of the ABC transporter complex NikABCDE (Opp2) involved in nickel import. Binds nickel and transfers it to the membrane-bound permease. Required for full urease activity and plays a significant role in the virulence of S.aureus during urinary tract infection (UTI). May bind nickel via a nickel-chelator.
  
  0.959
ABD30050.1
Conserved hypothetical protein; Belongs to the ABC transporter superfamily.
 
  0.955
ABD30049.1
Conserved hypothetical protein.
 
  0.909
ABD30051.1
Oligopeptide ABC transporter, ATP-binding protein, putative; Belongs to the ABC transporter superfamily.
 
 0.898
nikB
Oligopeptide transporter putative membrane permease domain; Part of the ABC transporter complex NikABCDE (Opp2) involved in nickel import. Probably responsible for the translocation of the substrate across the membrane. Required for full urease activity and plays a significant role in the virulence of S.aureus during urinary tract infection (UTI).
  
  
 
0.878
Your Current Organism:
Staphylococcus aureus
NCBI taxonomy Id: 93061
Other names: S. aureus subsp. aureus NCTC 8325, Staphylococcus aureus NCTC 8325, Staphylococcus aureus subsp. aureus NCTC 8325, Staphylococcus aureus subsp. aureus str. NCTC 8325, Staphylococcus aureus subsp. aureus strain NCTC 8325
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