STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABD30057.1Oligopeptide ABC transporter, permease protein, putative. (293 aa)    
Predicted Functional Partners:
ABD30054.1
Oligopeptide ABC transporter, ATP-binding protein, putative; Belongs to the ABC transporter superfamily.
 
  0.999
ABD30055.1
Oligopeptide ABC transporter, ATP-binding protein, putative; Belongs to the ABC transporter superfamily.
 
  0.999
ABD30056.1
Oligopeptide ABC transporter, permease protein, putative.
 
  0.999
ABD30053.1
Oligopeptide ABC transporter, substrate-binding protein, putative.
 
  0.998
ABD30050.1
Conserved hypothetical protein; Belongs to the ABC transporter superfamily.
 
  0.991
nikB
Oligopeptide transporter putative membrane permease domain; Part of the ABC transporter complex NikABCDE (Opp2) involved in nickel import. Probably responsible for the translocation of the substrate across the membrane. Required for full urease activity and plays a significant role in the virulence of S.aureus during urinary tract infection (UTI).
 
 
  0.983
cntD
Peptide ABC transporter, ATP-binding protein, putative; Part of the ABC transporter complex CntABCDF (Opp1) involved in the uptake of metal in complex with the metallophore staphylopine (StP). Involved in the import of divalent metals ions such as nickel, cobalt and zinc. Probably responsible for energy coupling to the transport system. Plays a major role in nickel/cobalt import in zinc-depleted conditions. Contributes to virulence. Required for full urease activity in vitro.
 
 
  0.981
ABD30051.1
Oligopeptide ABC transporter, ATP-binding protein, putative; Belongs to the ABC transporter superfamily.
 
 0.975
nikA
Conserved hypothetical protein; Part of the ABC transporter complex NikABCDE (Opp2) involved in nickel import. Binds nickel and transfers it to the membrane-bound permease. Required for full urease activity and plays a significant role in the virulence of S.aureus during urinary tract infection (UTI). May bind nickel via a nickel-chelator.
 
  0.953
ABD29345.1
Peptide ABC transporter, ATP-binding protein, putative; Belongs to the ABC transporter superfamily.
 
 
 0.938
Your Current Organism:
Staphylococcus aureus
NCBI taxonomy Id: 93061
Other names: S. aureus subsp. aureus NCTC 8325, Staphylococcus aureus NCTC 8325, Staphylococcus aureus subsp. aureus NCTC 8325, Staphylococcus aureus subsp. aureus str. NCTC 8325, Staphylococcus aureus subsp. aureus strain NCTC 8325
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