Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ABD30179.1Conserved hypothetical protein; Belongs to the UPF0358 family. (91 aa)    
Predicted Functional Partners:
ABD30187.1
Conserved hypothetical protein; Belongs to the UPF0342 family.
 
     0.808
ABD30178.1
Conserved hypothetical protein.
 
     0.748
ABD30177.1
Conserved hypothetical protein.
       0.712
ABD30371.1
Conserved hypothetical protein; Belongs to the UPF0342 family.
  
     0.662
ABD30264.1
Conserved hypothetical protein.
  
     0.653
ABD30180.1
Conserved hypothetical protein; Belongs to the SEDS family.
       0.637
ABD29987.1
Conserved hypothetical protein.
  
     0.549
ABD29745.1
Conserved hypothetical protein.
  
     0.540
ABD30588.1
Ferredoxin, putative.
  
     0.526
miaB
tRNA-i(6)A37 modification enzyme MiaB; Catalyzes the methylthiolation of N6-(dimethylallyl)adenosine (i(6)A), leading to the formation of 2-methylthio-N6- (dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine.
      
 0.522
Your Current Organism:
Staphylococcus aureus
NCBI taxonomy Id: 93061
Other names: S. aureus subsp. aureus NCTC 8325, Staphylococcus aureus NCTC 8325, Staphylococcus aureus subsp. aureus NCTC 8325, Staphylococcus aureus subsp. aureus str. NCTC 8325, Staphylococcus aureus subsp. aureus strain NCTC 8325
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