Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ABD30324.1Conserved hypothetical protein. (414 aa)    
Predicted Functional Partners:
lytN
Cell wall hydrolase, putative; Probably involved in peptidoglycan hydrolysis.
       0.682
ABD30148.1
Conserved hypothetical protein.
  
     0.674
ABD29811.1
Conserved hypothetical protein.
  
     0.673
ABD31192.1
Conserved hypothetical protein.
  
     0.648
ssaA
LysM domain protein; Not known; immunogenic protein.
  
     0.644
ezrA
Conserved hypothetical protein; Negative regulator of FtsZ ring formation; modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization; Belongs to the EzrA family.
  
     0.641
ABD29430.1
Conserved hypothetical protein.
  
     0.640
ABD30499.1
Conserved hypothetical protein.
  
     0.640
ABD31854.1
LysM domain protein.
  
     0.629
ABD29814.1
Major facilitator superfamily protein superfamily.
  
     0.628
Your Current Organism:
Staphylococcus aureus
NCBI taxonomy Id: 93061
Other names: S. aureus subsp. aureus NCTC 8325, Staphylococcus aureus NCTC 8325, Staphylococcus aureus subsp. aureus NCTC 8325, Staphylococcus aureus subsp. aureus str. NCTC 8325, Staphylococcus aureus subsp. aureus strain NCTC 8325
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