Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ABD29193.1 | ABD30180.1 | SAOUHSC_00002 | SAOUHSC_01063 | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | Conserved hypothetical protein; Belongs to the SEDS family. | 0.466 |
| ABD29193.1 | ABD30458.1 | SAOUHSC_00002 | SAOUHSC_01363 | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | Conserved hypothetical protein; Belongs to the DNA polymerase type-Y family. | 0.907 |
| ABD29193.1 | ABD30623.1 | SAOUHSC_00002 | SAOUHSC_01542 | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | SNF2 family N-terminal domain protein. | 0.883 |
| ABD29193.1 | dinG | SAOUHSC_00002 | SAOUHSC_01472 | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | DnaQ family exonuclease/DinG family helicase, putative; 3'-5' exonuclease; Belongs to the helicase family. DinG subfamily. Type 2 sub- subfamily. | 0.869 |
| ABD29193.1 | lexA | SAOUHSC_00002 | SAOUHSC_01333 | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | LexA repressor; Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair. | 0.500 |
| ABD29193.1 | polA | SAOUHSC_00002 | SAOUHSC_01797 | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity. | 0.997 |
| ABD29193.1 | recA | SAOUHSC_00002 | SAOUHSC_01262 | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | Recombination protein RecA, putative; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.872 |
| ABD30180.1 | ABD29193.1 | SAOUHSC_01063 | SAOUHSC_00002 | Conserved hypothetical protein; Belongs to the SEDS family. | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.466 |
| ABD30180.1 | ABD30458.1 | SAOUHSC_01063 | SAOUHSC_01363 | Conserved hypothetical protein; Belongs to the SEDS family. | Conserved hypothetical protein; Belongs to the DNA polymerase type-Y family. | 0.647 |
| ABD30180.1 | polA | SAOUHSC_01063 | SAOUHSC_01797 | Conserved hypothetical protein; Belongs to the SEDS family. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity. | 0.470 |
| ABD30367.1 | ABD30458.1 | SAOUHSC_01266 | SAOUHSC_01363 | Conserved hypothetical protein. | Conserved hypothetical protein; Belongs to the DNA polymerase type-Y family. | 0.569 |
| ABD30367.1 | recA | SAOUHSC_01266 | SAOUHSC_01262 | Conserved hypothetical protein. | Recombination protein RecA, putative; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.467 |
| ABD30457.1 | ABD30458.1 | SAOUHSC_01362 | SAOUHSC_01363 | 4-oxalocrotonate tautomerase, putative. | Conserved hypothetical protein; Belongs to the DNA polymerase type-Y family. | 0.745 |
| ABD30458.1 | ABD29193.1 | SAOUHSC_01363 | SAOUHSC_00002 | Conserved hypothetical protein; Belongs to the DNA polymerase type-Y family. | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.907 |
| ABD30458.1 | ABD30180.1 | SAOUHSC_01363 | SAOUHSC_01063 | Conserved hypothetical protein; Belongs to the DNA polymerase type-Y family. | Conserved hypothetical protein; Belongs to the SEDS family. | 0.647 |
| ABD30458.1 | ABD30367.1 | SAOUHSC_01363 | SAOUHSC_01266 | Conserved hypothetical protein; Belongs to the DNA polymerase type-Y family. | Conserved hypothetical protein. | 0.569 |
| ABD30458.1 | ABD30457.1 | SAOUHSC_01363 | SAOUHSC_01362 | Conserved hypothetical protein; Belongs to the DNA polymerase type-Y family. | 4-oxalocrotonate tautomerase, putative. | 0.745 |
| ABD30458.1 | ABD30623.1 | SAOUHSC_01363 | SAOUHSC_01542 | Conserved hypothetical protein; Belongs to the DNA polymerase type-Y family. | SNF2 family N-terminal domain protein. | 0.533 |
| ABD30458.1 | ABD31353.1 | SAOUHSC_01363 | SAOUHSC_02319 | Conserved hypothetical protein; Belongs to the DNA polymerase type-Y family. | Conserved hypothetical protein; Belongs to the SEDS family. | 0.647 |
| ABD30458.1 | dinG | SAOUHSC_01363 | SAOUHSC_01472 | Conserved hypothetical protein; Belongs to the DNA polymerase type-Y family. | DnaQ family exonuclease/DinG family helicase, putative; 3'-5' exonuclease; Belongs to the helicase family. DinG subfamily. Type 2 sub- subfamily. | 0.523 |
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