Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABD30581.1 | ABD30918.1 | SAOUHSC_01496 | SAOUHSC_01852 | Cytidylate kinase. | Conserved hypothetical protein. | 0.543 |
ABD30581.1 | ABD31183.1 | SAOUHSC_01496 | SAOUHSC_02135 | Cytidylate kinase. | Conserved hypothetical protein. | 0.608 |
ABD30581.1 | aroA | SAOUHSC_01496 | SAOUHSC_01481 | Cytidylate kinase. | 3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate. | 0.927 |
ABD30581.1 | aroB | SAOUHSC_01496 | SAOUHSC_01482 | Cytidylate kinase. | 3-dehydroquinate synthase; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ); Belongs to the sugar phosphate cyclases superfamily. Dehydroquinate synthase family. | 0.479 |
ABD30581.1 | aroC | SAOUHSC_01496 | SAOUHSC_01483 | Cytidylate kinase. | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | 0.402 |
ABD30581.1 | aroK | SAOUHSC_01496 | SAOUHSC_01635 | Cytidylate kinase. | Shikimate kinase, putative; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family. | 0.477 |
ABD30581.1 | tyrA | SAOUHSC_01496 | SAOUHSC_01364 | Cytidylate kinase. | Prephenate dehydrogenase, putative; Belongs to the prephenate/arogenate dehydrogenase family. | 0.805 |
ABD30822.1 | ABD31183.1 | SAOUHSC_01752 | SAOUHSC_02135 | ACT domain protein; Belongs to the UPF0735 family. | Conserved hypothetical protein. | 0.928 |
ABD30822.1 | tyrA | SAOUHSC_01752 | SAOUHSC_01364 | ACT domain protein; Belongs to the UPF0735 family. | Prephenate dehydrogenase, putative; Belongs to the prephenate/arogenate dehydrogenase family. | 0.921 |
ABD30918.1 | ABD30581.1 | SAOUHSC_01852 | SAOUHSC_01496 | Conserved hypothetical protein. | Cytidylate kinase. | 0.543 |
ABD30918.1 | ABD31183.1 | SAOUHSC_01852 | SAOUHSC_02135 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.993 |
ABD30918.1 | ABD31998.1 | SAOUHSC_01852 | SAOUHSC_03012 | Conserved hypothetical protein. | Histidinol-phosphate aminotransferase, putative. | 0.765 |
ABD30918.1 | aroA | SAOUHSC_01852 | SAOUHSC_01481 | Conserved hypothetical protein. | 3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate. | 0.998 |
ABD30918.1 | aroB | SAOUHSC_01852 | SAOUHSC_01482 | Conserved hypothetical protein. | 3-dehydroquinate synthase; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ); Belongs to the sugar phosphate cyclases superfamily. Dehydroquinate synthase family. | 0.997 |
ABD30918.1 | aroC | SAOUHSC_01852 | SAOUHSC_01483 | Conserved hypothetical protein. | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | 0.999 |
ABD30918.1 | aroK | SAOUHSC_01852 | SAOUHSC_01635 | Conserved hypothetical protein. | Shikimate kinase, putative; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family. | 0.968 |
ABD30918.1 | hisC | SAOUHSC_01852 | SAOUHSC_00733 | Conserved hypothetical protein. | Histidinol-phosphate aminotransferase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily. | 0.765 |
ABD30918.1 | tyrA | SAOUHSC_01852 | SAOUHSC_01364 | Conserved hypothetical protein. | Prephenate dehydrogenase, putative; Belongs to the prephenate/arogenate dehydrogenase family. | 0.990 |
ABD31183.1 | ABD30581.1 | SAOUHSC_02135 | SAOUHSC_01496 | Conserved hypothetical protein. | Cytidylate kinase. | 0.608 |
ABD31183.1 | ABD30822.1 | SAOUHSC_02135 | SAOUHSC_01752 | Conserved hypothetical protein. | ACT domain protein; Belongs to the UPF0735 family. | 0.928 |
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