STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABD30485.1Truncated transposase. (98 aa)    
Predicted Functional Partners:
ABD31648.1
Truncated transposase.
 
     0.774
ABD29420.1
Truncated transposase.
 
     0.773
ABD30873.1
Truncated transposase, putative.
 
     0.773
ABD30968.1
Truncated transposase, putative.
 
     0.773
ABD31459.1
Conserved hypothetical protein.
 
     0.773
ABD31460.1
Conserved hypothetical protein.
 
     0.773
ABD31597.1
Conserved hypothetical protein.
 
     0.773
ABD30946.1
Conserved hypothetical protein.
 
     0.772
ABD30504.1
Truncated transposase.
 
     0.750
ABD32053.1
Conserved hypothetical protein.
       0.565
Your Current Organism:
Staphylococcus aureus
NCBI taxonomy Id: 93061
Other names: S. aureus subsp. aureus NCTC 8325, Staphylococcus aureus NCTC 8325, Staphylococcus aureus subsp. aureus NCTC 8325, Staphylococcus aureus subsp. aureus str. NCTC 8325, Staphylococcus aureus subsp. aureus strain NCTC 8325
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.