STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABD30506.1Conserved hypothetical protein. (628 aa)    
Predicted Functional Partners:
ABD30507.1
Conserved hypothetical protein.
 
  
 0.983
ABD30508.1
Conserved hypothetical protein.
 
     0.871
ABD30032.1
Conserved hypothetical protein.
  
     0.753
ABD30509.1
Conserved hypothetical protein.
       0.710
ABD30505.1
Branched-chain amino acid transport system II carrier protein; Component of the transport system for branched-chain amino acids (leucine, isoleucine and valine), which is coupled to a proton motive force (Potential). Contributes to NaCl tolerance.
       0.704
ABD31369.1
Conserved hypothetical protein.
  
     0.662
ABD30076.1
Conserved hypothetical protein; Belongs to the 2H phosphoesterase superfamily. YjcG family.
  
     0.651
ABD30178.1
Conserved hypothetical protein.
  
     0.635
traP
Conserved hypothetical protein; Signal transduction protein, which is a major regulator of staphylococcal pathogenesis. Phosphorylated TRAP leads to the activation of agr system and consequent RNAIII synthesis resulting in the expression of several virulence factors. Upregulates the expression of most toxins and genes known to be necessary for biofilm formation.
  
     0.594
ABD30190.1
Conserved hypothetical protein.
  
     0.540
Your Current Organism:
Staphylococcus aureus
NCBI taxonomy Id: 93061
Other names: S. aureus subsp. aureus NCTC 8325, Staphylococcus aureus NCTC 8325, Staphylococcus aureus subsp. aureus NCTC 8325, Staphylococcus aureus subsp. aureus str. NCTC 8325, Staphylococcus aureus subsp. aureus strain NCTC 8325
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.