Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ABD30588.1Ferredoxin, putative. (74 aa)    
Predicted Functional Partners:
ABD30586.1
ATP-dependent DNA helicase RecQ, putative.
       0.714
ABD30587.1
Conserved hypothetical protein.
       0.714
ABD30371.1
Conserved hypothetical protein; Belongs to the UPF0342 family.
  
     0.708
ABD30367.1
Conserved hypothetical protein.
     
 0.667
ABD30187.1
Conserved hypothetical protein; Belongs to the UPF0342 family.
  
     0.644
ABD30561.1
Conserved hypothetical protein.
      
 0.618
ABD30562.1
Conserved hypothetical protein.
      
 0.618
pcrB
Conserved hypothetical protein; Prenyltransferase that catalyzes in vivo the transfer of the heptaprenyl moiety of heptaprenyl pyrophosphate (HepPP; 35 carbon atoms) to the C3 hydroxyl of sn-glycerol-1-phosphate (G1P), producing heptaprenylglyceryl phosphate (HepGP). This reaction is an ether-bond- formation step in the biosynthesis of archaea-type G1P-based membrane lipids found in Bacillales. To a much lesser extent, is also able to use geranylgeranyl diphosphate (GGPP; C20) as the prenyl donor.
  
     0.600
ABD29745.1
Conserved hypothetical protein.
  
     0.592
ABD30563.1
Conserved hypothetical protein.
  
     0.588
Your Current Organism:
Staphylococcus aureus
NCBI taxonomy Id: 93061
Other names: S. aureus subsp. aureus NCTC 8325, Staphylococcus aureus NCTC 8325, Staphylococcus aureus subsp. aureus NCTC 8325, Staphylococcus aureus subsp. aureus str. NCTC 8325, Staphylococcus aureus subsp. aureus strain NCTC 8325
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