STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABD30606.1Holin-like protein. (274 aa)    
Predicted Functional Partners:
ABD30605.1
SLT orf 527-like protein.
 
    0.965
ABD30607.1
Phage tail tape meausure protein, TP901 family, core region domain protein.
 
     0.942
ABD30602.1
SLT orf 488-like protein.
  
    0.852
ABD30611.1
Major tail protein.
 
     0.827
ABD30608.1
Conserved hypothetical phage protein.
       0.782
ABD30604.1
Conserved hypothetical phage protein.
       0.773
ABD30614.1
SLT orf 110-like protein.
 
     0.743
ABD30600.1
Conserved hypothetical phage protein.
       0.741
ABD30601.1
SLT orf 129-like protein.
       0.741
ABD30603.1
SLT orf 636-like protein.
       0.741
Your Current Organism:
Staphylococcus aureus
NCBI taxonomy Id: 93061
Other names: S. aureus subsp. aureus NCTC 8325, Staphylococcus aureus NCTC 8325, Staphylococcus aureus subsp. aureus NCTC 8325, Staphylococcus aureus subsp. aureus str. NCTC 8325, Staphylococcus aureus subsp. aureus strain NCTC 8325
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.