Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ABD30607.1Phage tail tape meausure protein, TP901 family, core region domain protein. (2066 aa)    
Predicted Functional Partners:
ABD30605.1
SLT orf 527-like protein.
 
    0.949
ABD30606.1
Holin-like protein.
 
     0.941
ABD30611.1
Major tail protein.
 
     0.812
ABD30608.1
Conserved hypothetical phage protein.
       0.810
ABD30618.1
Phage portal protein, HK97 family.
 
     0.790
ABD30604.1
Conserved hypothetical phage protein.
       0.773
ABD30619.1
Phage terminase, large subunit, putative.
 
     0.773
ABD30602.1
SLT orf 488-like protein.
       0.744
ABD30603.1
SLT orf 636-like protein.
  
    0.742
ABD30600.1
Conserved hypothetical phage protein.
       0.741
Your Current Organism:
Staphylococcus aureus
NCBI taxonomy Id: 93061
Other names: S. aureus subsp. aureus NCTC 8325, Staphylococcus aureus NCTC 8325, Staphylococcus aureus subsp. aureus NCTC 8325, Staphylococcus aureus subsp. aureus str. NCTC 8325, Staphylococcus aureus subsp. aureus strain NCTC 8325
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