Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ABD30610.1Bacteriophage L54a, bacterial Ig-like domain group 2 family protein. (151 aa)    
Predicted Functional Partners:
ABD30614.1
SLT orf 110-like protein.
 
     0.785
ABD30613.1
SLT orf 123-like protein.
 
     0.760
ABD30611.1
Major tail protein.
 
     0.701
ABD30605.1
SLT orf 527-like protein.
 
     0.665
ABD30606.1
Holin-like protein.
 
     0.655
ABD30602.1
SLT orf 488-like protein.
   
   0.621
ABD30609.1
Conserved hypothetical phage protein.
       0.601
ABD30607.1
Phage tail tape meausure protein, TP901 family, core region domain protein.
 
     0.584
ABD30621.1
Bacteriophage L54a, HNH endonuclease family protein.
 
     0.520
ABD30608.1
Conserved hypothetical phage protein.
       0.505
Your Current Organism:
Staphylococcus aureus
NCBI taxonomy Id: 93061
Other names: S. aureus subsp. aureus NCTC 8325, Staphylococcus aureus NCTC 8325, Staphylococcus aureus subsp. aureus NCTC 8325, Staphylococcus aureus subsp. aureus str. NCTC 8325, Staphylococcus aureus subsp. aureus strain NCTC 8325
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