Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ABD30612.1Conserved hypothetical phage protein. (131 aa)    
Predicted Functional Partners:
ABD30614.1
SLT orf 110-like protein.
       0.840
ABD30613.1
SLT orf 123-like protein.
       0.811
ABD30615.1
Conserved hypothetical phage protein.
       0.766
ABD30611.1
Major tail protein.
       0.751
ABD30619.1
Phage terminase, large subunit, putative.
       0.646
ABD31231.1
Phage protein, HK97 gp10 family.
  
    0.627
ABD30616.1
Conserved hypothetical phage protein.
  
    0.602
ABD30617.1
Scaffolding protease; Belongs to the peptidase S14 family.
       0.590
ABD30618.1
Phage portal protein, HK97 family.
       0.583
ABD30620.1
Terminase-small subunit.
       0.578
Your Current Organism:
Staphylococcus aureus
NCBI taxonomy Id: 93061
Other names: S. aureus subsp. aureus NCTC 8325, Staphylococcus aureus NCTC 8325, Staphylococcus aureus subsp. aureus NCTC 8325, Staphylococcus aureus subsp. aureus str. NCTC 8325, Staphylococcus aureus subsp. aureus strain NCTC 8325
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