STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABD30620.1Terminase-small subunit. (101 aa)    
Predicted Functional Partners:
ABD30618.1
Phage portal protein, HK97 family.
  
    0.847
ABD30619.1
Phage terminase, large subunit, putative.
  
    0.810
ABD30617.1
Scaffolding protease; Belongs to the peptidase S14 family.
  
    0.784
ABD30616.1
Conserved hypothetical phage protein.
       0.763
ABD30621.1
Bacteriophage L54a, HNH endonuclease family protein.
  
    0.664
ABD30612.1
Conserved hypothetical phage protein.
       0.576
ABD30615.1
Conserved hypothetical phage protein.
       0.570
ABD30613.1
SLT orf 123-like protein.
       0.562
ABD30614.1
SLT orf 110-like protein.
       0.562
ABD31236.1
Prohead protease.
     
 0.519
Your Current Organism:
Staphylococcus aureus
NCBI taxonomy Id: 93061
Other names: S. aureus subsp. aureus NCTC 8325, Staphylococcus aureus NCTC 8325, Staphylococcus aureus subsp. aureus NCTC 8325, Staphylococcus aureus subsp. aureus str. NCTC 8325, Staphylococcus aureus subsp. aureus strain NCTC 8325
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