Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ABD30688.1Conserved hypothetical protein. (326 aa)    
Predicted Functional Partners:
ABD30689.1
Conserved hypothetical protein; Belongs to the UPF0403 family.
       0.844
ABD30690.1
2-oxoisovalerate dehydrogenase, E2 component, dihydrolipoamide acetyltransferase, putative.
       0.627
ABD30691.1
2-oxoisovalerate dehydrogenase, E1 component, beta subunit, putative.
       0.622
ABD30692.1
2-oxoisovalerate dehydrogenase, E1 component, alpha subunit, putative.
       0.622
ABD30693.1
Dihydrolipoamide dehydrogenase.
       0.606
ABD31150.1
Conserved hypothetical protein.
  
     0.558
ABD31153.1
Conserved hypothetical protein; Belongs to the UPF0421 family.
 
     0.547
ABD30015.1
Conserved hypothetical protein.
  
     0.526
ABD31141.1
Conserved hypothetical phage protein.
  
     0.507
ABD30065.1
Conserved hypothetical protein.
  
     0.462
Your Current Organism:
Staphylococcus aureus
NCBI taxonomy Id: 93061
Other names: S. aureus subsp. aureus NCTC 8325, Staphylococcus aureus NCTC 8325, Staphylococcus aureus subsp. aureus NCTC 8325, Staphylococcus aureus subsp. aureus str. NCTC 8325, Staphylococcus aureus subsp. aureus strain NCTC 8325
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