STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABD30745.1Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family. (134 aa)    
Predicted Functional Partners:
pdp
Pyrimidine nucleoside phosphorylase, putative; Catalyzes phosphorolysis of the pyrimidine nucleosides uridine, thymidine and 2'-deoxyuridine with the formation of the corresponding pyrimidine base and ribose-1-phosphate. Belongs to the thymidine/pyrimidine-nucleoside phosphorylase family.
 
 
 0.984
tdk
Thymidine kinase, putative.
 
  
 0.957
udk
Uridine kinase.
  
 
 0.954
ABD29687.1
Conserved hypothetical protein.
     
 0.945
ABD30748.1
Conserved hypothetical protein.
  
    0.908
ABD29214.1
Conserved hypothetical protein.
 
  
  0.902
deoD
Purine nucleoside phosphorylase.
  
 
 0.898
deoD-2
Purine nucleoside phosphorylase.
  
 
 0.898
ABD29288.1
Conserved hypothetical protein; Belongs to the 5'-nucleotidase family.
    
  0.888
ABD30085.1
Conserved hypothetical protein; Belongs to the 5'-nucleotidase family.
    
  0.888
Your Current Organism:
Staphylococcus aureus
NCBI taxonomy Id: 93061
Other names: S. aureus subsp. aureus NCTC 8325, Staphylococcus aureus NCTC 8325, Staphylococcus aureus subsp. aureus NCTC 8325, Staphylococcus aureus subsp. aureus str. NCTC 8325, Staphylococcus aureus subsp. aureus strain NCTC 8325
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