Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ABD29193.1 | ABD30815.1 | SAOUHSC_00002 | SAOUHSC_01744 | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | Conserved hypothetical protein. | 0.532 |
| ABD29193.1 | ABD31061.1 | SAOUHSC_00002 | SAOUHSC_02005 | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | A/G-specific adenine glycosylase, putative; Adenine glycosylase active on G-A mispairs. | 0.657 |
| ABD29193.1 | mutL | SAOUHSC_00002 | SAOUHSC_01273 | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | DNA mismatch repair protein HexB, putative; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex. | 0.988 |
| ABD29193.1 | mutS | SAOUHSC_00002 | SAOUHSC_01272 | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | DNA mismatch repair protein MutS; This protein is involved in the repair of mismatches in DNA. It is possible that it carries out the mismatch recognition step. This protein has a weak ATPase activity (By similarity). | 0.918 |
| ABD30694.1 | ABD30815.1 | SAOUHSC_01615 | SAOUHSC_01744 | DNA repair protein RecN; May be involved in recombinational repair of damaged DNA. | Conserved hypothetical protein. | 0.739 |
| ABD30694.1 | ABD31061.1 | SAOUHSC_01615 | SAOUHSC_02005 | DNA repair protein RecN; May be involved in recombinational repair of damaged DNA. | A/G-specific adenine glycosylase, putative; Adenine glycosylase active on G-A mispairs. | 0.541 |
| ABD30694.1 | mutL | SAOUHSC_01615 | SAOUHSC_01273 | DNA repair protein RecN; May be involved in recombinational repair of damaged DNA. | DNA mismatch repair protein HexB, putative; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex. | 0.519 |
| ABD30694.1 | mutS | SAOUHSC_01615 | SAOUHSC_01272 | DNA repair protein RecN; May be involved in recombinational repair of damaged DNA. | DNA mismatch repair protein MutS; This protein is involved in the repair of mismatches in DNA. It is possible that it carries out the mismatch recognition step. This protein has a weak ATPase activity (By similarity). | 0.535 |
| ABD30694.1 | ribBA | SAOUHSC_01615 | SAOUHSC_01887 | DNA repair protein RecN; May be involved in recombinational repair of damaged DNA. | Riboflavin biosynthesis protein, putative; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family. | 0.451 |
| ABD30815.1 | ABD29193.1 | SAOUHSC_01744 | SAOUHSC_00002 | Conserved hypothetical protein. | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.532 |
| ABD30815.1 | ABD30694.1 | SAOUHSC_01744 | SAOUHSC_01615 | Conserved hypothetical protein. | DNA repair protein RecN; May be involved in recombinational repair of damaged DNA. | 0.739 |
| ABD30815.1 | ABD31061.1 | SAOUHSC_01744 | SAOUHSC_02005 | Conserved hypothetical protein. | A/G-specific adenine glycosylase, putative; Adenine glycosylase active on G-A mispairs. | 0.664 |
| ABD30815.1 | mutL | SAOUHSC_01744 | SAOUHSC_01273 | Conserved hypothetical protein. | DNA mismatch repair protein HexB, putative; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex. | 0.632 |
| ABD30815.1 | mutS | SAOUHSC_01744 | SAOUHSC_01272 | Conserved hypothetical protein. | DNA mismatch repair protein MutS; This protein is involved in the repair of mismatches in DNA. It is possible that it carries out the mismatch recognition step. This protein has a weak ATPase activity (By similarity). | 0.665 |
| ABD30815.1 | nth | SAOUHSC_01744 | SAOUHSC_01469 | Conserved hypothetical protein. | Endonuclease III, putative; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate. | 0.537 |
| ABD31059.1 | ABD31060.1 | SAOUHSC_02003 | SAOUHSC_02004 | ABC transporter, ATP-binding/permease protein, putative; May be involved in multidrug export. Transmembrane domains (TMD) form a pore in the cell membrane and the ATP-binding domain (NBD) is responsible for energy generation (By similarity); Belongs to the ABC transporter superfamily. | Conserved hypothetical protein; Belongs to the UPF0374 family. | 0.535 |
| ABD31059.1 | ABD31061.1 | SAOUHSC_02003 | SAOUHSC_02005 | ABC transporter, ATP-binding/permease protein, putative; May be involved in multidrug export. Transmembrane domains (TMD) form a pore in the cell membrane and the ATP-binding domain (NBD) is responsible for energy generation (By similarity); Belongs to the ABC transporter superfamily. | A/G-specific adenine glycosylase, putative; Adenine glycosylase active on G-A mispairs. | 0.569 |
| ABD31059.1 | ABD31062.1 | SAOUHSC_02003 | SAOUHSC_02006 | ABC transporter, ATP-binding/permease protein, putative; May be involved in multidrug export. Transmembrane domains (TMD) form a pore in the cell membrane and the ATP-binding domain (NBD) is responsible for energy generation (By similarity); Belongs to the ABC transporter superfamily. | Conserved hypothetical protein. | 0.552 |
| ABD31060.1 | ABD31059.1 | SAOUHSC_02004 | SAOUHSC_02003 | Conserved hypothetical protein; Belongs to the UPF0374 family. | ABC transporter, ATP-binding/permease protein, putative; May be involved in multidrug export. Transmembrane domains (TMD) form a pore in the cell membrane and the ATP-binding domain (NBD) is responsible for energy generation (By similarity); Belongs to the ABC transporter superfamily. | 0.535 |
| ABD31060.1 | ABD31061.1 | SAOUHSC_02004 | SAOUHSC_02005 | Conserved hypothetical protein; Belongs to the UPF0374 family. | A/G-specific adenine glycosylase, putative; Adenine glycosylase active on G-A mispairs. | 0.740 |
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