STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lytOAutolysin; Has weak lytic activity toward S.aureus cells. Belongs to the N-acetylmuramoyl-L-alanine amidase 2 family. (481 aa)    
Predicted Functional Partners:
ABD31076.1
Holin.
 
     0.875
ABD29850.1
Conserved hypothetical protein.
  
     0.749
ABD29427.1
Conserved hypothetical protein.
  
     0.704
ABD31087.1
Phage tape measure protein.
 
     0.678
ABD31079.1
Bifunctional autolysin precursor.
  
 
 
0.639
ABD31077.1
Phi ETA orf 63-like protein.
       0.605
ABD31078.1
Phage tail fiber protein, putative.
       0.605
ABD29964.1
Conserved hypothetical protein.
  
     0.580
ABD31485.1
Conserved hypothetical protein; Belongs to the HAD-like hydrolase superfamily.
  
     0.575
lytH
Conserved hypothetical protein; Probably involved in cell-wall metabolism (By similarity). May have autolysin activity. Belongs to the N-acetylmuramoyl-L-alanine amidase 3 family.
    
 0.515
Your Current Organism:
Staphylococcus aureus
NCBI taxonomy Id: 93061
Other names: S. aureus subsp. aureus NCTC 8325, Staphylococcus aureus NCTC 8325, Staphylococcus aureus subsp. aureus NCTC 8325, Staphylococcus aureus subsp. aureus str. NCTC 8325, Staphylococcus aureus subsp. aureus strain NCTC 8325
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.