STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABD31087.1Phage tape measure protein. (1155 aa)    
Predicted Functional Partners:
ABD31085.1
Phi ETA orf 55-like protein.
  
 
 0.975
ABD31090.1
Phage structural protein, putative.
 
 
 
 0.968
ABD31084.1
Phi ETA orf 56-like protein.
  
 
 0.964
ABD31083.1
phiETA ORF57-like protein.
  
   0.960
ABD31086.1
Conserved hypothetical phage protein.
  
   0.951
ABD31078.1
Phage tail fiber protein, putative.
   
   0.873
ABD31081.1
Phi ETA orf 58-like protein-related protein.
     
 0.808
ABD31088.1
Conserved hypothetical phage protein.
       0.737
ABD31096.1
Phage head protein, putative.
 
     0.736
ABD31082.1
SLT orf 129-like protein.
       0.731
Your Current Organism:
Staphylococcus aureus
NCBI taxonomy Id: 93061
Other names: S. aureus subsp. aureus NCTC 8325, Staphylococcus aureus NCTC 8325, Staphylococcus aureus subsp. aureus NCTC 8325, Staphylococcus aureus subsp. aureus str. NCTC 8325, Staphylococcus aureus subsp. aureus strain NCTC 8325
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