Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ABD31090.1Phage structural protein, putative. (193 aa)    
Predicted Functional Partners:
ABD31094.1
Phi Mu50B-like protein.
 
 
   0.988
ABD31091.1
Conserved hypothetical phage protein.
   
   0.981
ABD31092.1
Phage protein, HK97 gp10 family.
   
   0.961
ABD31093.1
Conserved hypothetical phage protein.
   
   0.952
ABD31085.1
Phi ETA orf 55-like protein.
   
 
 0.934
ABD31084.1
Phi ETA orf 56-like protein.
   
 
 0.930
ABD31086.1
Conserved hypothetical phage protein.
   
   0.899
ABD31083.1
phiETA ORF57-like protein.
   
   0.891
ABD31097.1
Conserved hypothetical phage protein.
 
     0.875
ABD31087.1
Phage tape measure protein.
 
   
 0.865
Your Current Organism:
Staphylococcus aureus
NCBI taxonomy Id: 93061
Other names: S. aureus subsp. aureus NCTC 8325, Staphylococcus aureus NCTC 8325, Staphylococcus aureus subsp. aureus NCTC 8325, Staphylococcus aureus subsp. aureus str. NCTC 8325, Staphylococcus aureus subsp. aureus strain NCTC 8325
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