Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ABD31091.1Conserved hypothetical phage protein. (127 aa)    
Predicted Functional Partners:
ABD31093.1
Conserved hypothetical phage protein.
   
   0.982
ABD31090.1
Phage structural protein, putative.
   
   0.981
ABD31092.1
Phage protein, HK97 gp10 family.
   
   0.968
ABD31094.1
Phi Mu50B-like protein.
   
   0.967
ABD31095.1
Phi Mu50B-like protein.
       0.762
ABD31096.1
Phage head protein, putative.
       0.750
ABD31097.1
Conserved hypothetical phage protein.
       0.744
ABD31089.1
Conserved hypothetical phage protein.
       0.610
ABD31088.1
Conserved hypothetical phage protein.
       0.525
ABD31087.1
Phage tape measure protein.
       0.499
Your Current Organism:
Staphylococcus aureus
NCBI taxonomy Id: 93061
Other names: S. aureus subsp. aureus NCTC 8325, Staphylococcus aureus NCTC 8325, Staphylococcus aureus subsp. aureus NCTC 8325, Staphylococcus aureus subsp. aureus str. NCTC 8325, Staphylococcus aureus subsp. aureus strain NCTC 8325
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