Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ABD31093.1Conserved hypothetical phage protein. (100 aa)    
Predicted Functional Partners:
ABD31094.1
Phi Mu50B-like protein.
   
   0.983
ABD31091.1
Conserved hypothetical phage protein.
   
   0.982
ABD31092.1
Phage protein, HK97 gp10 family.
   
   0.968
ABD31090.1
Phage structural protein, putative.
   
   0.952
ABD31095.1
Phi Mu50B-like protein.
       0.773
ABD31096.1
Phage head protein, putative.
       0.736
ABD31097.1
Conserved hypothetical phage protein.
       0.718
ABD31089.1
Conserved hypothetical phage protein.
       0.587
ABD31088.1
Conserved hypothetical phage protein.
       0.492
ABD31086.1
Conserved hypothetical phage protein.
       0.484
Your Current Organism:
Staphylococcus aureus
NCBI taxonomy Id: 93061
Other names: S. aureus subsp. aureus NCTC 8325, Staphylococcus aureus NCTC 8325, Staphylococcus aureus subsp. aureus NCTC 8325, Staphylococcus aureus subsp. aureus str. NCTC 8325, Staphylococcus aureus subsp. aureus strain NCTC 8325
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