Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ABD31130.1Phi PV83 orf 10-like protein. (149 aa)    
Predicted Functional Partners:
ABD31128.1
Phi PVL orf 38-like protein-related protein.
       0.773
ABD31129.1
Phi PV83 orf 12-like protein-related protein.
       0.773
ABD31112.1
Phi PVL orf 51-like protein.
     
 0.716
ABD31131.1
Conserved hypothetical phage protein.
       0.642
ABD31132.1
Bacteriophage L54a, antirepressor, putative.
       0.642
ABD31085.1
Phi ETA orf 55-like protein.
     
 0.609
ABD31081.1
Phi ETA orf 58-like protein-related protein.
     
 0.608
ABD31084.1
Phi ETA orf 56-like protein.
     
 0.608
ABD31126.1
Phi PVL orf 39-like protein.
       0.542
ABD31127.1
Conserved hypothetical phage protein.
       0.542
Your Current Organism:
Staphylococcus aureus
NCBI taxonomy Id: 93061
Other names: S. aureus subsp. aureus NCTC 8325, Staphylococcus aureus NCTC 8325, Staphylococcus aureus subsp. aureus NCTC 8325, Staphylococcus aureus subsp. aureus str. NCTC 8325, Staphylococcus aureus subsp. aureus strain NCTC 8325
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