STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABD31226.1Tail length tape measure protein. (1550 aa)    
Predicted Functional Partners:
ABD31236.1
Prohead protease.
 
   
 0.866
ABD31224.1
Phage minor structural protein, N-terminal region domain protein.
 
     0.856
ABD31225.1
Phi PVL orfs 18-19-like protein.
  
    0.850
ABD31237.1
Phage portal protein, HK97 family.
 
    0.834
ABD31102.1
Terminase small subunit, putative.
 
  
 0.827
ABD31239.1
Phage terminase, large subunit, putative.
 
     0.815
ABD31235.1
Phage major capsid protein, HK97 family.
 
    0.787
ABD31229.1
Phi PVL orf 13-like protein.
 
    0.762
ABD31223.1
Conserved hypothetical phage protein.
       0.755
ABD31240.1
Phage terminase, small subunit, putative.
 
     0.736
Your Current Organism:
Staphylococcus aureus
NCBI taxonomy Id: 93061
Other names: S. aureus subsp. aureus NCTC 8325, Staphylococcus aureus NCTC 8325, Staphylococcus aureus subsp. aureus NCTC 8325, Staphylococcus aureus subsp. aureus str. NCTC 8325, Staphylococcus aureus subsp. aureus strain NCTC 8325
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