Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
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[Homology]
Score
ABD31241.1Conserved hypothetical phage protein. (114 aa)    
Predicted Functional Partners:
ABD31240.1
Phage terminase, small subunit, putative.
 
    0.920
ABD31239.1
Phage terminase, large subunit, putative.
 
  
 0.918
ABD31237.1
Phage portal protein, HK97 family.
 
    0.872
ABD31236.1
Prohead protease.
 
     0.858
ABD31235.1
Phage major capsid protein, HK97 family.
 
     0.843
ABD30619.1
Phage terminase, large subunit, putative.
 
  
 0.783
ABD30621.1
Bacteriophage L54a, HNH endonuclease family protein.
  
     0.769
ABD31242.1
Phi PVL orf 62-like protein.
  
    0.750
ABD31226.1
Tail length tape measure protein.
 
    0.690
ABD31229.1
Phi PVL orf 13-like protein.
 
     0.664
Your Current Organism:
Staphylococcus aureus
NCBI taxonomy Id: 93061
Other names: S. aureus subsp. aureus NCTC 8325, Staphylococcus aureus NCTC 8325, Staphylococcus aureus subsp. aureus NCTC 8325, Staphylococcus aureus subsp. aureus str. NCTC 8325, Staphylococcus aureus subsp. aureus strain NCTC 8325
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