Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ABD31454.1Hypothetical protein. (41 aa)    
Predicted Functional Partners:
ABD31453.1
ABC transporter periplasmic binding protein, putative.
       0.515
ABD31451.1
Conserved hypothetical protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
       0.508
ABD31452.1
Conserved hypothetical protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
       0.508
ABD29418.1
NADH dehydrogenase subunit, putative.
      
 0.480
ABD29458.1
Hypothetical protein.
      
 0.480
ABD30039.1
2-isopropylmalate synthase, putative; Belongs to the alpha-IPM synthase/homocitrate synthase family.
      
 0.480
ABD30040.1
Conserved hypothetical protein; Belongs to the SUA5 family.
      
 0.480
ABD30041.1
Conserved hypothetical protein.
      
 0.480
ABD31470.1
Pts system, lactose-specific IIBC component, putative.
      
 0.480
ABD31471.1
PTS system lactose-specific IIA component, putative.
      
 0.480
Your Current Organism:
Staphylococcus aureus
NCBI taxonomy Id: 93061
Other names: S. aureus subsp. aureus NCTC 8325, Staphylococcus aureus NCTC 8325, Staphylococcus aureus subsp. aureus NCTC 8325, Staphylococcus aureus subsp. aureus str. NCTC 8325, Staphylococcus aureus subsp. aureus strain NCTC 8325
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